Brain Tumor Liquid Biopsy Developed

A noninvasive brain tumor biopsy technique is being developed by a team of researchers from Washington University in St. Louis. According to the team, this simple blood test could potentially eliminate the need for surgical biopsy.

Hong Chen, Ph.D., a biomedical engineer, and Eric C. Leuthardt, M.D., a neurosurgeon, led a team whose proof-of-concept method permits biomarkers from a brain tumor to pass through the tough blood-brain barrier into a patient’s blood using noninvasive focused ultrasound and some tiny bubbles, potentially eliminating the need for a surgical biopsy.

Dr. Chen, assistant professor of biomedical engineering in the School of Engineering & Applied Science and of radiation oncology in the School of Medicine, said while researchers have already learned how to get a drug through the blood-brain barrier into the brain via the bloodstream, no one, until now, has found a way to release tumor-specific biomarkers, in this case, mRNA, from the brain into the blood.

“I see a clear path for the clinical translation of this technique,” said Dr. Chen, an expert in ultrasound technology. “Blood-based liquid biopsies have been used in other cancers, but not in the brain. Our proposed technique may make it possible to perform a blood test for brain cancer patients.”

The blood test would reveal the amount of mRNA in the blood, which gives physicians specific information about the tumor that can help with diagnosis and treatment options.

Results of the study (“Focused Ultrasound-Enabled Brain Tumor Liquid Biopsy”), which blends imaging, mechanobiology, genomics, immunology, bioinformatics, oncology, radiology, and neurosurgery, are published in Scientific Reports. 

“Although blood-based liquid biopsies have emerged as a promising non-invasive method to detect biomarkers in various cancers, limited progress has been made for brain tumors. One major obstacle is the blood-brain barrier (BBB), which hinders efficient passage of tumor biomarkers into the peripheral circulation. The objective of this study was to determine whether FUS [focused ultrasound] in combination with microbubbles can enhance the release of biomarkers from the brain tumor to the blood circulation. Two glioblastoma tumor models (U87 and GL261), developed by intracranial injection of respective enhanced green fluorescent protein (eGFP)-transduced glioblastoma cells, were treated by FUS in the presence of systemically injected microbubbles. Effect of FUS on plasma eGFP mRNA levels was determined using quantitative polymerase chain reaction. eGFP mRNA were only detectable in the FUS-treated U87 mice and undetectable in the untreated U87 mice (maximum cycle number set to 40),” write the investigators.

“This finding was replicated in GL261 mice across three different acoustic pressures. The circulating levels of eGFP mRNA were 1,500 – 4,800 fold higher in the FUS-treated GL261 mice than that of the untreated mice for the three acoustic pressures. This study demonstrated the feasibility of FUS-enabled brain tumor liquid biopsies in two different murine glioma models across different acoustic pressures.”

The researchers targeted the tumor in a mouse model using focused ultrasound, a technique that uses ultrasonic energy to target tissue deep in the body without incisions or radiation. Similar to a magnifying glass that can focus sunlight to a tiny point, focused ultrasound concentrates ultrasound energy to a tiny point deep into the brain.

Once they had the target, i.e., the brain tumor, the team then injected microbubbles that travel through the blood similar to red blood cells. When the microbubbles reached the target, they popped, causing tiny ruptures of the blood-brain barrier that allows the biomarkers from the brain tumor to pass through the barrier and release into the bloodstream. A blood sample can determine the biomarkers in the tumor.

This technique could lead to personalized medicine, according to Dr. Leuthardt.

“In many ways this has been a holy grail for brain tumor therapy,” he said. “Having the ability to monitor the changing molecular events of the tumor in an ongoing way allows us to not only better diagnose a tumor in the brain, but also to follow its response to different types of treatment.”

“Once the blood–brain barrier is open, physicians can deliver drugs to the brain tumor,” added Dr. Chen. “Physicians can also collect the blood and detect the expression level of biomarkers in the patient. It enables them to perform molecular characterizations of the brain tumor from a blood draw and guide the choice of treatment for individual patients.”

In addition, Gavin Dunn, M.D., assistant professor of neurosurgery, a co-author and leader in cancer immunobiology, plans to use the technique with immunotherapy, which offers precision treatment that targets specific biomarkers in the brain.

“This noninvasive focused ultrasound-enabled liquid biopsy technique can be useful for long-term monitoring of brain cancer treatment response, where repeated surgical tissue biopsies may not be feasible,” noted Dr. Chen. “Meanwhile, variations within tumors pose a significant challenge to cancer biomarker research. Focused ultrasound can precisely target different locations of the tumor, thereby causing biomarkers to be released in a spatially localized manner and allow us to better understand the spatial variations of the tumor and develop better treatment.”

The team continues to work to refine the process. The future will require integration with advanced genomic sequencing and bioinformatics to enable even more refined diagnostics.

“Our ongoing work is to optimize the technique and evaluate its sensitivity and safety,” Dr. Chen said.